[EMBOSS] Help: About Jemboss

Tim Carver tjc at sanger.ac.uk
Mon Apr 30 07:30:49 UTC 2007


Hi Amy

You need to install them together with the script:

EMBOSS-4.0.0-5/jemboss/utils/install-jemboss-server.sh

As described at:

http://emboss.sourceforge.net/Jemboss/install/setup.html

Regards
Tim


On 29/4/07 07:35, "Lee Amy" <openlinuxsource at gmail.com> wrote:

> Hi,
> 
> I've installed EMBOSS-4.0.0-5, and download the Jemboss GUI. To do in my
> local machine, I change the runJemboss.sh in Installation Guide. When I run
> the Jemboss, the screen shows
> 
> [root at localhost jemboss]# RunEmbossApplication2 Error executing:
> /usr/local/bin/wossname -colon -gui -auto
> Exception in thread "Thread-1" java.lang.NullPointerException
>         at org.emboss.jemboss.programs.RunEmbossApplication2.waitFor(
> RunEmbossApplication2.java:338)
>         at org.emboss.jemboss.gui.BuildProgramMenu$1.construct(
> BuildProgramMenu.java:256)
>         at org.emboss.jemboss.gui.SwingWorker$2.run(SwingWorker.java:127)
>         at java.lang.Thread.run(Thread.java:595)
> 
> Java Env is JRE1.5.0_09
> 
> Can someone tell me how to solve the problem?
> 
> Thanks in advance!
> 
> Amy Lee
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss





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