[EMBOSS] Help: About Jemboss

Tim Carver tjc at sanger.ac.uk
Mon Apr 30 10:13:00 UTC 2007


Hi Amy

It has been pointed out to me that EMBOSS-4.0.0-5 may have been supplied by
someone else as an RPM. In which case it may not support Jemboss and you may
need to contact the supplier.

Regards
Tim

On 30/4/07 08:30, "Tim Carver" <tjc at sanger.ac.uk> wrote:

> Hi Amy
> 
> You need to install them together with the script:
> 
> EMBOSS-4.0.0-5/jemboss/utils/install-jemboss-server.sh
> 
> As described at:
> 
> http://emboss.sourceforge.net/Jemboss/install/setup.html
> 
> Regards
> Tim
> 
> 
> On 29/4/07 07:35, "Lee Amy" <openlinuxsource at gmail.com> wrote:
> 
>> Hi,
>> 
>> I've installed EMBOSS-4.0.0-5, and download the Jemboss GUI. To do in my
>> local machine, I change the runJemboss.sh in Installation Guide. When I run
>> the Jemboss, the screen shows
>> 
>> [root at localhost jemboss]# RunEmbossApplication2 Error executing:
>> /usr/local/bin/wossname -colon -gui -auto
>> Exception in thread "Thread-1" java.lang.NullPointerException
>>         at org.emboss.jemboss.programs.RunEmbossApplication2.waitFor(
>> RunEmbossApplication2.java:338)
>>         at org.emboss.jemboss.gui.BuildProgramMenu$1.construct(
>> BuildProgramMenu.java:256)
>>         at org.emboss.jemboss.gui.SwingWorker$2.run(SwingWorker.java:127)
>>         at java.lang.Thread.run(Thread.java:595)
>> 
>> Java Env is JRE1.5.0_09
>> 
>> Can someone tell me how to solve the problem?
>> 
>> Thanks in advance!
>> 
>> Amy Lee
>> _______________________________________________
>> EMBOSS mailing list
>> EMBOSS at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/emboss
> 
> 
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss





More information about the EMBOSS mailing list