[EMBOSS] 30 entries only

Rodrigo Lopez rls at ebi.ac.uk
Tue Oct 24 09:01:50 UTC 2006

I'll have to wait for our SRS admin to come back to find out if a change 
has in fact taken place or not. hmm....


pmr at ebi.ac.uk wrote:
> Rodrigo Lopez writes:
>> I suspect this is related to the default view used in SRS. It is
>> returning the first page of results that contains 30 sequences (the
>> default). To overcome this problem, the call need to have the following
>> parameters:
>> http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?[uniprot-des:kinase]+-vn+1+-lv+100
> But this is using the EMBOSS "srswww" access method, which uses
> +-e+-ascii
> That should return complete entries for all as ascii text.
> Perhaps something has changed on the EBI's SRS server because this now
> only gives me 30 entries.
> +-lv+100 does give 100 entries ... but it will take some reworking of the
> code to loop through entries that way. Hmmmm.....
> regards,
> Peter

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