[EMBOSS] EMBOSS explorer

Sumit Middha smiddha at indiana.edu
Wed Jul 27 20:28:56 UTC 2005


Hi,
Its great to hear of the interface. I want to install it to my own directories
(possibly the same where I untar everything) and then I will manage to point my
web-pages or cgi etc to these. But I am not sure how to achieve that.

This is my attempt at installation. Can someone help me with this. THanks.


> ./install
installing EMBOSS Explorer perl modules...

Checking if your kit is complete...
Looks good
Writing Makefile for EMBOSS::GUI
cp lib/EMBOSS/ACD.pm blib/lib/EMBOSS/ACD.pm
cp lib/EMBOSS/GUI.pm blib/lib/EMBOSS/GUI.pm
cp lib/EMBOSS/GUI/Conf.pm blib/lib/EMBOSS/GUI/Conf.pm
cp lib/EMBOSS/GUI/XHTML.pm blib/lib/EMBOSS/GUI/XHTML.pm
Manifying blib/man3/EMBOSS::GUI.3
Manifying blib/man3/EMBOSS::ACD.3
Manifying blib/man3/EMBOSS::GUI::Conf.3
Manifying blib/man3/EMBOSS::GUI::XHTML.3
Warning: You do not have permissions to install into
/usr/local/lib/perl5/site_perl/5.8.5/sun4-solaris at
/usr/local/lib/perl5/5.8.5/ExtUtils/Install.pm line 114.
mkdir /usr/local/lib/perl5/site_perl/5.8.5/EMBOSS: Permission denied at
/usr/local/lib/perl5/5.8.5/ExtUtils/Install.pm line 176
*** Error code 255
make: Fatal error: Command failed for target `pure_site_install'


Quoting Luke McCarthy <lukem at gene.pbi.nrc.ca>:

> Hi everybody,
> 
> I'm pleased to finally announce a new release of the EMBOSS interface
> formerly known as EMBOSS::GUI, now known as EMBOSS explorer.
> 
> Development has moved to SourceForge.net and the new home page for the
> interface is http://embossgui.sourceforge.net/  It's quite spartan at
> the moment, but I'll be adding a FAQ as questions are frequent asked
> (and answered...)
> 
> You can download EMBOSS explorer at
> http://prdownloads.sourceforge.net/embossgui/emboss-explorer-2.0.0.tar.gz?download
> 
> The new release has been tested against EMBOSS-3.0.0, but not
> thoroughly.  Please report bugs using the bug tracker at
> http://sourceforge.net/tracker/?atid=699414&group_id=124389&func=browse
> (as a last resort, email them to mccarthy at users.sourceforge.net, but I'm
> hoping that use of the bug tracker will help with duplicate reports and
> other organizational issues...)
> 
> Cheers,
> 
> Luke
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at emboss.open-bio.org
> http://newportal.open-bio.org/mailman/listinfo/emboss
> 



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