[EMBOSS] URL dbs

Peter Rice pmr at ebi.ac.uk
Mon Nov 8 16:01:20 UTC 2004


Stefan Rensing wrote:

> Hi there,
> 
> can somebody please advice me which current public servers I might use 
> to configure URL-based emboss sequence databases?
> 
> I'm mainly interested in Genbank nr and Uniprot. A syntax example would 
> be gratefully acknowledged.

I am about to implement access to SeqHound (seqhound.blueprint.org). They have 
a simple API interface that we can use as an alternative to the SRSWWW 
interface. The main server is in Toronto, but there may be others around.

Would anyone be interested in testing it?

Peter Rice




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