Mutiple alignement of blast results

Lisa Mullan lmullan at
Wed Mar 5 15:46:33 UTC 2003

You could try putting your BLAST results into
which will covert them to fasta format, and then you can carry on with your
multiple sequence alignment.

Discussions abound as to who might write a BLAST wrapper or EMBOSS, but
nothing has happened so far, although there are offers!


Lisa  Mullan
  -----Original Message-----
  From: owner-emboss at [mailto:owner-emboss at]On
Behalf Of Jean-Christophe AME
  Sent: Wednesday, March 05, 2003 3:44 PM
  To: emboss at
  Subject: Mutiple alignement of blast results

  Hi all,
  I am looking for a program (preferably for unix or Mac) that does a
multiple alignment of a blast result. There used to be Mulblast
( but it
doesn't seem to work anymore with the last blast outputs.

  Does anybody have any idea on the subject. This could be a nice and useful
EMBOSS program.
  Thanks for any help.

  Jean-Christophe Amé, PhD
  U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et
  École Supérieure de Biotechnologie de Strasbourg
  Pôle API
  Boulevard Sébastien-Brant
  67400 Illkirch

  tel.: 33 3 90 24 47 05
  Fax.: 33 3 90 24 46 86
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