How do I specific human genome CHR_01 database at .embossrc file

[Charles Plessy]

Hi,

I used home sequences so I had to reformat the headers to something
"ncbi compliant" like lcl|foo.

see the formatdb readme for more info :
http://www.inb.mu-luebeck.de/biosoft/blast/README.formatdb

I had to use formatdb vith the option -o T , to generate more files.

I then used dbiflat normally

Hese is an extract of my embossrc :

DB ngn [
   type: N
   method: blast
   format: ncbi
   dir: /home/charles/bioinfo/blast
   indexdir: /home/charles/bioinfo/blast/ngn
   file: "ngn"
   release: "0.0"
]

Charles