[DAS2] biopackages DAS/2 server passed validation

[Brian Gilman]

Great Guys,

	Thanks very much.

-B
--
Brian Gilman
President Panther Informatics Inc.
E-Mail: gilmanb at pantherinformatics.com
         gilmanb at jforge.net
AIM: gilmanb1

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On Nov 15, 2006, at 12:43 AM, Helt,Gregg wrote:

> The Affy Genometry DAS/2 server code is in the Genoviz CVS  
> repository on
> sourceforge (http://sourceforge.net/projects/genoviz/), under the
> das2_server directory.  The core of it is a servlet,
> com.affymetrix.genometry.servlets.GenometryDas2Servlet.  There is  
> also a
> main class com.affymetrix.genometry.servlets.GenometryDas2Server that
> wraps the servlet inside a Jetty server and initializes server and
> servlet (though with enough configuration tinkering the servlet could
> probably be run in any servlet-supporting HTTP server).  The servlet
> depends heavily on code in the  genometry and igb directories.
>
> 	Gregg
>
>> -----Original Message-----
>> From: das2-bounces at lists.open-bio.org [mailto:das2- 
>> bounces at lists.open-
>> bio.org] On Behalf Of Brian Gilman
>> Sent: Tuesday, November 14, 2006 6:28 PM
>> To: Brian O'Connor
>> Cc: das2 at lists.open-bio.org
>> Subject: Re: [DAS2] biopackages DAS/2 server passed validation
>>
>> Hey Guys,
>>
>> 	Is the source posted for the BioPackages and Affy server code
> posted
>> on biodas? I'd like to utilize it to start on my other scientific
>> projects.
>>
>> Best,
>>
>> -B
>> --
>> Brian Gilman
>> President Panther Informatics Inc.
>> E-Mail: gilmanb at pantherinformatics.com
>>          gilmanb at jforge.net
>> AIM: gilmanb1
>>
>> 01000010 01101001 01101111
>> 01001001 01101110 01100110
>> 01101111 01110010 01101101
>> 01100001 01110100 01101001
>> 01100011 01101001 01100001
>> 01101110
>>
>>
>>
>> On Nov 14, 2006, at 7:46 PM, Brian O'Connor wrote:
>>
>>> Hi,
>>>
>>> I finished validating the DAS/2 server at biopackages.net using
>>> Andrew's
>>> validator.  After making a few small tweaks all document types pass.
>>> Here are the URLs I validated with:
>>>
>>> * http://das.biopackages.net/das/genome
>>> * http://das.biopackages.net/das/genome/human/17/segment
>>> * http://das.biopackages.net/das/genome/human/17/type
>>> *
>>> http://das.biopackages.net/das/genome/human/17/feature?segment=http%
>>> 3A%2F%2Fwww.ncbi.nlm.nih.gov%2Fgenome%2FH_sapiens%2FB36.1%2Fdna%
>>> 2Fchr1;overlaps=1:1000
>>>
>>> I also fixed the bug with the "type" attribute in the CAPABILITY
>>> elements.  They now are "features", "types", or "segments" to be
>>> compliant with the spec.
>>>
>>> --Brian
>>> _______________________________________________
>>> DAS2 mailing list
>>> DAS2 at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/das2
>>>
>>
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