[DAS2] biopackages DAS/2 server passed validation

[Helt,Gregg]

The Affy Genometry DAS/2 server code is in the Genoviz CVS repository on
sourceforge (http://sourceforge.net/projects/genoviz/), under the
das2_server directory.  The core of it is a servlet,
com.affymetrix.genometry.servlets.GenometryDas2Servlet.  There is also a
main class com.affymetrix.genometry.servlets.GenometryDas2Server that
wraps the servlet inside a Jetty server and initializes server and
servlet (though with enough configuration tinkering the servlet could
probably be run in any servlet-supporting HTTP server).  The servlet
depends heavily on code in the  genometry and igb directories.

	Gregg

> -----Original Message-----
> From: das2-bounces at lists.open-bio.org [mailto:das2-bounces at lists.open-
> bio.org] On Behalf Of Brian Gilman
> Sent: Tuesday, November 14, 2006 6:28 PM
> To: Brian O'Connor
> Cc: das2 at lists.open-bio.org
> Subject: Re: [DAS2] biopackages DAS/2 server passed validation
> 
> Hey Guys,
> 
> 	Is the source posted for the BioPackages and Affy server code
posted
> on biodas? I'd like to utilize it to start on my other scientific
> projects.
> 
> Best,
> 
> -B
> --
> Brian Gilman
> President Panther Informatics Inc.
> E-Mail: gilmanb at pantherinformatics.com
>          gilmanb at jforge.net
> AIM: gilmanb1
> 
> 01000010 01101001 01101111
> 01001001 01101110 01100110
> 01101111 01110010 01101101
> 01100001 01110100 01101001
> 01100011 01101001 01100001
> 01101110
> 
> 
> 
> On Nov 14, 2006, at 7:46 PM, Brian O'Connor wrote:
> 
> > Hi,
> >
> > I finished validating the DAS/2 server at biopackages.net using
> > Andrew's
> > validator.  After making a few small tweaks all document types pass.
> > Here are the URLs I validated with:
> >
> > * http://das.biopackages.net/das/genome
> > * http://das.biopackages.net/das/genome/human/17/segment
> > * http://das.biopackages.net/das/genome/human/17/type
> > *
> > http://das.biopackages.net/das/genome/human/17/feature?segment=http%
> > 3A%2F%2Fwww.ncbi.nlm.nih.gov%2Fgenome%2FH_sapiens%2FB36.1%2Fdna%
> > 2Fchr1;overlaps=1:1000
> >
> > I also fixed the bug with the "type" attribute in the CAPABILITY
> > elements.  They now are "features", "types", or "segments" to be
> > compliant with the spec.
> >
> > --Brian
> > _______________________________________________
> > DAS2 mailing list
> > DAS2 at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/das2
> >
> 
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