September 2005 Archives by subject

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Starting: Wed Sep 7 21:15:54 EST 2005
Ending: Mon Sep 26 09:24:27 EST 2005
Messages: 99

• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb, 1.21, 1.22 clustalw.rb, 1.5, 1.6 emboss.rb, 1.1, 1.2 fasta.rb, 1.17, 1.18 mafft.rb, 1.4, 1.5 psort.rb, 1.4, 1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile bdb.rb, 1.5, 1.6 index.rb, 1.9, 1.10 indexer.rb, 1.17, 1.18   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile bdb.rb, 1.7, 1.8 index.rb, 1.13, 1.14 indexer.rb, 1.20, 1.21   Katayama Toshiaki
• [BioRuby-cvs] bioruby ChangeLog,1.39,1.40   Naohisa Goto
• [BioRuby-cvs] bioruby ChangeLog,1.40,1.41   Katayama Toshiaki
• [BioRuby-cvs] bioruby gemspec.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby README,1.9,1.10   Katayama Toshiaki
• [BioRuby-cvs] bioruby README.DEV,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby README.DEV,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/bin bioruby,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/bin bioruby,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Changes-0.7.rd,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Changes-0.7.rd,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.2,1.3   Pjotr Prins
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.3,1.4   Pjotr Prins
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.4,1.5   Pjotr Prins
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.5,1.6   Pjotr Prins
• [BioRuby-cvs] bioruby/lib bio.rb,1.44,1.45   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib bio.rb,1.45,1.46   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.46,1.47   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.47,1.48   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.48,1.49   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.49,1.50   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.50,1.51   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.51,1.52   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.52,1.53   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.53,1.54   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.54,1.55   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio alignment.rb, 1.7, 1.8 db.rb, 0.27, 0.28 feature.rb, 1.5, 1.6 location.rb, 0.18, 0.19 pathway.rb, 1.29, 1.30 reference.rb, 1.16, 1.17 sequence.rb, 0.40, 0.41   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio alignment.rb, 1.8, 1.9 location.rb, 0.19, 0.20 sequence.rb, 0.43, 0.44   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio sequence.rb,0.41,0.42   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio sequence.rb,0.42,0.43   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio shell.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio shell.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb, 1.25, 1.26 fasta.rb, 1.19, 1.20 hmmer.rb, 1.3, 1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb,1.22,1.23   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb,1.23,1.24   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl clustalw.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl fasta.rb,1.18,1.19   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl hmmer.rb,1.2,1.3   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl mafft.rb,1.5,1.6   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl psort.rb,1.5,1.6   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl sim4.rb,1.1,1.2   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/bl2seq report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb, 1.11, 1.12 report.rb, 1.8, 1.9   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb, 1.9, 1.10 format8.rb, 1.4, 1.5 report.rb, 1.6, 1.7 rexml.rb, 1.9, 1.10 wublast.rb, 1.1, 1.2 xmlparser.rb, 1.12, 1.13   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb,1.10,1.11   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/blast report.rb,1.7,1.8   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/blat report.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/clustalw report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/clustalw report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb, 1.3, 1.4 format6.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb,1.4,1.5   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/genscan report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/mafft report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/mafft report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/psort report.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/psort report.rb,1.8,1.9   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/sim4 report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/sosui report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/sosui report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/spidey report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/targetp report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/targetp report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/tmhmm report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/tmhmm report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/data aa.rb, 0.11, 0.12 codontable.rb, 0.12, 0.13 na.rb, 0.13, 0.14   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db aaindex.rb, 1.12, 1.13 fantom.rb, 1.9, 1.10 fasta.rb, 1.19, 1.20 gff.rb, 1.1, 1.2 go.rb, 1.6, 1.7 medline.rb, 1.11, 1.12 nbrf.rb, 1.2, 1.3 prosite.rb, 0.9, 0.10 transfac.rb, 1.8, 1.9   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db fantom.rb, 1.10, 1.11 fasta.rb, 1.20, 1.21 gff.rb, 1.2, 1.3 go.rb, 1.7, 1.8 nbrf.rb, 1.3, 1.4 prosite.rb, 0.10, 0.11   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/embl common.rb, 1.3, 1.4 sptr.rb, 1.24, 1.25   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/embl uniprot.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank common.rb, 1.5, 1.6 genbank.rb, 0.33, 0.34 genpept.rb, 1.6, 1.7   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank ddbj.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/db/genbank genbank.rb, 0.34, 0.35 genpept.rb, 1.8, 1.9   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank genpept.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/kegg brite.rb, 0.5, 0.6 cell.rb, 1.6, 1.7 compound.rb, 0.10, 0.11 enzyme.rb, 0.7, 0.8 genes.rb, 0.19, 0.20 genome.rb, 0.13, 0.14 glycan.rb, 1.1, 1.2 keggtab.rb, 1.5, 1.6 ko.rb, 1.4, 1.5 reaction.rb, 1.2, 1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/kegg keggtab.rb,1.6,1.7   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/pdb atom.rb, 1.1, 1.2 pdb.rb, 1.1, 1.2 utils.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/pdb chain.rb, 1.1, 1.2 model.rb, 1.1, 1.2 pdb.rb, 1.2, 1.3 residue.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io brdb.rb, 1.2, 1.3 das.rb, 1.7, 1.8 dbget.rb, 1.9, 1.10 flatfile.rb, 1.35, 1.36 pubmed.rb, 1.11, 1.12 registry.rb, 1.12, 1.13 sql.rb, 1.2, 1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io brdb.rb, 1.3, 1.4 das.rb, 1.8, 1.9 ddbjxml.rb, 1.5, 1.6 fastacmd.rb, 1.7, 1.8 flatfile.rb, 1.36, 1.37 higet.rb, 1.1, 1.2 keggapi.rb, 1.8, 1.9 registry.rb, 1.13, 1.14   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io sql.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile index.rb, 1.10, 1.11 indexer.rb, 1.18, 1.19 bdb.rb, 1.6, 1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/shell - New directory   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb, NONE, 1.1 session.rb, NONE, 1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin - New directory   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin flatfile.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin seq.rb, NONE, 1.1 flatfile.rb, NONE, 1.1 obda.rb, NONE, 1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin seq.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/util sirna.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/test all_tests.rb,1.1,NONE   Katayama Toshiaki
• [BioRuby-cvs] bioruby/test runner.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/test/bio suite_bio.rb,1.1,NONE   Katayama Toshiaki

Last message date: Mon Sep 26 09:24:27 EST 2005
Archived on: Thu Oct 27 10:06:48 EST 2005

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