September 2005 Archives by date

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Starting: Wed Sep 7 21:15:54 EST 2005
Ending: Mon Sep 26 09:24:27 EST 2005
Messages: 99

• [BioRuby-cvs] bioruby/lib bio.rb,1.44,1.45   Katayama Toshiaki
• [BioRuby-cvs] bioruby gemspec.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio alignment.rb, 1.7, 1.8 db.rb, 0.27, 0.28 feature.rb, 1.5, 1.6 location.rb, 0.18, 0.19 pathway.rb, 1.29, 1.30 reference.rb, 1.16, 1.17 sequence.rb, 0.40, 0.41   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb, 1.21, 1.22 clustalw.rb, 1.5, 1.6 emboss.rb, 1.1, 1.2 fasta.rb, 1.17, 1.18 mafft.rb, 1.4, 1.5 psort.rb, 1.4, 1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/bl2seq report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb, 1.9, 1.10 format8.rb, 1.4, 1.5 report.rb, 1.6, 1.7 rexml.rb, 1.9, 1.10 wublast.rb, 1.1, 1.2 xmlparser.rb, 1.12, 1.13   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blat report.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/clustalw report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb, 1.3, 1.4 format6.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/genscan report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/mafft report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/psort report.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/sim4 report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/sosui report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/spidey report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/targetp report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/tmhmm report.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db aaindex.rb, 1.12, 1.13 fantom.rb, 1.9, 1.10 fasta.rb, 1.19, 1.20 gff.rb, 1.1, 1.2 go.rb, 1.6, 1.7 medline.rb, 1.11, 1.12 nbrf.rb, 1.2, 1.3 prosite.rb, 0.9, 0.10 transfac.rb, 1.8, 1.9   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/kegg brite.rb, 0.5, 0.6 cell.rb, 1.6, 1.7 compound.rb, 0.10, 0.11 enzyme.rb, 0.7, 0.8 genes.rb, 0.19, 0.20 genome.rb, 0.13, 0.14 glycan.rb, 1.1, 1.2 keggtab.rb, 1.5, 1.6 ko.rb, 1.4, 1.5 reaction.rb, 1.2, 1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/pdb atom.rb, 1.1, 1.2 pdb.rb, 1.1, 1.2 utils.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io brdb.rb, 1.2, 1.3 das.rb, 1.7, 1.8 dbget.rb, 1.9, 1.10 flatfile.rb, 1.35, 1.36 pubmed.rb, 1.11, 1.12 registry.rb, 1.12, 1.13 sql.rb, 1.2, 1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile bdb.rb, 1.5, 1.6 index.rb, 1.9, 1.10 indexer.rb, 1.17, 1.18   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/util sirna.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.2,1.3   Pjotr Prins
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.3,1.4   Pjotr Prins
• [BioRuby-cvs] bioruby/lib bio.rb,1.45,1.46   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile index.rb, 1.10, 1.11 indexer.rb, 1.18, 1.19 bdb.rb, 1.6, 1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.46,1.47   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.47,1.48   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb,1.22,1.23   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb,1.10,1.11   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.48,1.49   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl fasta.rb,1.18,1.19   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb,1.4,1.5   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb,1.23,1.24   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/blast report.rb,1.7,1.8   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.49,1.50   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl hmmer.rb,1.2,1.3   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.50,1.51   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl psort.rb,1.5,1.6   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl/psort report.rb,1.8,1.9   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.51,1.52   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl clustalw.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.52,1.53   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl mafft.rb,1.5,1.6   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.53,1.54   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/appl sim4.rb,1.1,1.2   Naohisa Goto
• [BioRuby-cvs] bioruby/lib bio.rb,1.54,1.55   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/db/genbank ddbj.rb,1.6,1.7   Naohisa Goto
• [BioRuby-cvs] bioruby ChangeLog,1.39,1.40   Naohisa Goto
• [BioRuby-cvs] bioruby/lib/bio/db/embl uniprot.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.4,1.5   Pjotr Prins
• [BioRuby-cvs] bioruby/lib/bio sequence.rb,0.41,0.42   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Tutorial.rd,1.5,1.6   Pjotr Prins
• [BioRuby-cvs] bioruby/test all_tests.rb,1.1,NONE   Katayama Toshiaki
• [BioRuby-cvs] bioruby/test/bio suite_bio.rb,1.1,NONE   Katayama Toshiaki
• [BioRuby-cvs] bioruby/test runner.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell - New directory   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin - New directory   Katayama Toshiaki
• [BioRuby-cvs] bioruby/bin bioruby,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio shell.rb,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb, NONE, 1.1 session.rb, NONE, 1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin seq.rb, NONE, 1.1 flatfile.rb, NONE, 1.1 obda.rb, NONE, 1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Changes-0.7.rd,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio sequence.rb,0.42,0.43   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin seq.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/bin bioruby,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio shell.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell core.rb,1.2,1.3   Katayama Toshiaki
• [BioRuby-cvs] bioruby README.DEV,NONE,1.1   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/shell/plugin flatfile.rb,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby README,1.9,1.10   Katayama Toshiaki
• [BioRuby-cvs] bioruby README.DEV,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby ChangeLog,1.40,1.41   Katayama Toshiaki
• [BioRuby-cvs] bioruby/doc Changes-0.7.rd,1.1,1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio alignment.rb, 1.8, 1.9 location.rb, 0.19, 0.20 sequence.rb, 0.43, 0.44   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl blast.rb, 1.25, 1.26 fasta.rb, 1.19, 1.20 hmmer.rb, 1.3, 1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb, 1.11, 1.12 report.rb, 1.8, 1.9   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/clustalw report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/fasta format10.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/mafft report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/sosui report.rb,1.5,1.6   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/targetp report.rb,1.4,1.5   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/appl/tmhmm report.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/data aa.rb, 0.11, 0.12 codontable.rb, 0.12, 0.13 na.rb, 0.13, 0.14   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/embl common.rb, 1.3, 1.4 sptr.rb, 1.24, 1.25   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db fantom.rb, 1.10, 1.11 fasta.rb, 1.20, 1.21 gff.rb, 1.2, 1.3 go.rb, 1.7, 1.8 nbrf.rb, 1.3, 1.4 prosite.rb, 0.10, 0.11   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank common.rb, 1.5, 1.6 genbank.rb, 0.33, 0.34 genpept.rb, 1.6, 1.7   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/kegg keggtab.rb,1.6,1.7   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/pdb chain.rb, 1.1, 1.2 model.rb, 1.1, 1.2 pdb.rb, 1.2, 1.3 residue.rb, 1.1, 1.2   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io brdb.rb, 1.3, 1.4 das.rb, 1.8, 1.9 ddbjxml.rb, 1.5, 1.6 fastacmd.rb, 1.7, 1.8 flatfile.rb, 1.36, 1.37 higet.rb, 1.1, 1.2 keggapi.rb, 1.8, 1.9 registry.rb, 1.13, 1.14   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io/flatfile bdb.rb, 1.7, 1.8 index.rb, 1.13, 1.14 indexer.rb, 1.20, 1.21   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/io sql.rb,1.3,1.4   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank genpept.rb,1.7,1.8   Katayama Toshiaki
• [BioRuby-cvs] bioruby/lib/bio/db/genbank genbank.rb, 0.34, 0.35 genpept.rb, 1.8, 1.9   Katayama Toshiaki

Last message date: Mon Sep 26 09:24:27 EST 2005
Archived on: Thu Oct 27 10:06:48 EST 2005

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