[BioRuby-cvs] bioruby/lib/bio/shell/plugin codon.rb,1.5,1.6

Katayama Toshiaki k at pub.open-bio.org
Sun Nov 27 10:01:19 EST 2005


Update of /home/repository/bioruby/bioruby/lib/bio/shell/plugin
In directory pub.open-bio.org:/tmp/cvs-serv6845/lib/bio/shell/plugin

Modified Files:
	codon.rb 
Log Message:
* codontables method is fixed (to follow changes of Bio::CodonTable::Definition
  -> DEFINITION)


Index: codon.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/shell/plugin/codon.rb,v
retrieving revision 1.5
retrieving revision 1.6
diff -C2 -d -r1.5 -r1.6
*** codon.rb	25 Nov 2005 16:01:28 -0000	1.5
--- codon.rb	27 Nov 2005 15:01:17 -0000	1.6
***************
*** 197,201 ****
  
    def codontables
!     Bio::CodonTable::Definitions.sort.each do |i, definition|
        puts "#{i}\t#{definition}"
      end
--- 197,201 ----
  
    def codontables
!     Bio::CodonTable::DEFINITIONS.sort.each do |i, definition|
        puts "#{i}\t#{definition}"
      end



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