[BioRuby-cvs] bioruby/lib/bio/appl psort.rb,1.7,1.8

Mitsuteru C. Nakao nakao at pub.open-bio.org
Tue Nov 1 00:15:17 EST 2005


Update of /home/repository/bioruby/bioruby/lib/bio/appl
In directory pub.open-bio.org:/tmp/cvs-serv6652/lib/bio/appl

Modified Files:
	psort.rb 
Log Message:
* Removed TAB.


Index: psort.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/psort.rb,v
retrieving revision 1.7
retrieving revision 1.8
diff -C2 -d -r1.7 -r1.8
*** psort.rb	31 Oct 2005 10:26:58 -0000	1.7
--- psort.rb	1 Nov 2005 05:15:15 -0000	1.8
***************
*** 64,74 ****
      WWWServer = {
        'IMSUT'   => {'host' => 'psort.hgc.jp', #'psort.ims.u-tokyo.ac.jp', 
!  	            'PSORT1' => '/cgi-bin/okumura.pl',
!  	            'PSORT2' => '/cgi-bin/runpsort.pl'},
        'Okazaki' => {'host' => 'psort.nibb.ac.jp', 
!  	            'PSORT1' => '/cgi-bin/okumura.pl',
                      'PSORT2' => '/cgi-bin/runpsort.pl'},
        'Peking'  => {'host' => 'srs.pku.edu.en:8088', 
!  	            'PSORT1' => '/cgi-bin/okumura.pl',
                      'PSORT2' => '/cgi-bin/runpsort.pl'}
      }
--- 64,74 ----
      WWWServer = {
        'IMSUT'   => {'host' => 'psort.hgc.jp', #'psort.ims.u-tokyo.ac.jp', 
!                     'PSORT1' => '/cgi-bin/okumura.pl',
!                     'PSORT2' => '/cgi-bin/runpsort.pl'},
        'Okazaki' => {'host' => 'psort.nibb.ac.jp', 
!                     'PSORT1' => '/cgi-bin/okumura.pl',
                      'PSORT2' => '/cgi-bin/runpsort.pl'},
        'Peking'  => {'host' => 'srs.pku.edu.en:8088', 
!                     'PSORT1' => '/cgi-bin/okumura.pl',
                      'PSORT2' => '/cgi-bin/runpsort.pl'}
      }
***************
*** 135,144 ****
        # Bio::CGIDriver#parse_report. An API skelton.
        def parse_report(result_body)
!         # The routin should be provided in the inherited class	
        end
  
        # Erases HTML tags
        def erase_html_tags(str)
!         return str.gsub(/<\S.*?>/,'')	
        end
  
--- 135,144 ----
        # Bio::CGIDriver#parse_report. An API skelton.
        def parse_report(result_body)
!         # The routin should be provided in the inherited class
        end
  
        # Erases HTML tags
        def erase_html_tags(str)
!         return str.gsub(/<\S.*?>/,'')
        end
  
***************
*** 450,454 ****
  
    begin
!     require 'psort/report.rb'	
    rescue LoadError
    end
--- 450,454 ----
  
    begin
!     require 'psort/report.rb'
    rescue LoadError
    end



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