[BioRuby-cvs] bioruby/lib/bio/appl psort.rb,1.7,1.8
Mitsuteru C. Nakao
nakao at pub.open-bio.org
Tue Nov 1 00:15:17 EST 2005
Update of /home/repository/bioruby/bioruby/lib/bio/appl
In directory pub.open-bio.org:/tmp/cvs-serv6652/lib/bio/appl
Modified Files:
psort.rb
Log Message:
* Removed TAB.
Index: psort.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/psort.rb,v
retrieving revision 1.7
retrieving revision 1.8
diff -C2 -d -r1.7 -r1.8
*** psort.rb 31 Oct 2005 10:26:58 -0000 1.7
--- psort.rb 1 Nov 2005 05:15:15 -0000 1.8
***************
*** 64,74 ****
WWWServer = {
'IMSUT' => {'host' => 'psort.hgc.jp', #'psort.ims.u-tokyo.ac.jp',
! 'PSORT1' => '/cgi-bin/okumura.pl',
! 'PSORT2' => '/cgi-bin/runpsort.pl'},
'Okazaki' => {'host' => 'psort.nibb.ac.jp',
! 'PSORT1' => '/cgi-bin/okumura.pl',
'PSORT2' => '/cgi-bin/runpsort.pl'},
'Peking' => {'host' => 'srs.pku.edu.en:8088',
! 'PSORT1' => '/cgi-bin/okumura.pl',
'PSORT2' => '/cgi-bin/runpsort.pl'}
}
--- 64,74 ----
WWWServer = {
'IMSUT' => {'host' => 'psort.hgc.jp', #'psort.ims.u-tokyo.ac.jp',
! 'PSORT1' => '/cgi-bin/okumura.pl',
! 'PSORT2' => '/cgi-bin/runpsort.pl'},
'Okazaki' => {'host' => 'psort.nibb.ac.jp',
! 'PSORT1' => '/cgi-bin/okumura.pl',
'PSORT2' => '/cgi-bin/runpsort.pl'},
'Peking' => {'host' => 'srs.pku.edu.en:8088',
! 'PSORT1' => '/cgi-bin/okumura.pl',
'PSORT2' => '/cgi-bin/runpsort.pl'}
}
***************
*** 135,144 ****
# Bio::CGIDriver#parse_report. An API skelton.
def parse_report(result_body)
! # The routin should be provided in the inherited class
end
# Erases HTML tags
def erase_html_tags(str)
! return str.gsub(/<\S.*?>/,'')
end
--- 135,144 ----
# Bio::CGIDriver#parse_report. An API skelton.
def parse_report(result_body)
! # The routin should be provided in the inherited class
end
# Erases HTML tags
def erase_html_tags(str)
! return str.gsub(/<\S.*?>/,'')
end
***************
*** 450,454 ****
begin
! require 'psort/report.rb'
rescue LoadError
end
--- 450,454 ----
begin
! require 'psort/report.rb'
rescue LoadError
end
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