[Bioperl-l] barcode split a paired-end fastq file

[Matthew]

Are there any BioPerl modules that would help to split a barcoded fastq 
file ?

I have tried FASTX-toolkit, but it does not work on paired-end data.

The file I have been given is paired-end but a single file, and I have a 
list of 8 or so 4 letter barcodes.


Matthew