[Bioperl-l] module Bio::TreeIO

Fields, Christopher J cjfields at illinois.edu
Tue May 10 14:06:27 UTC 2016


You can either submit a Github Issue or fork the repo, generate the document fix, then generate a pull request (we accept either, though pull requests make our life a lot easier :)

chris

> On May 10, 2016, at 7:54 AM, lskatz <lskatz at gmail.com> wrote:
> 
> That's what I thought originally too but the R package made it look like
> there might be some magic bootstrapping going on with distances alone.  If
> there truly is no distance-matrix bootstrapping algorithm then I am left to
> my devices and at least I can make use of assess_bootstrap().
> 
> By the way, if I can make a documentation bug report -- it looks like
> assess_bootstrap() only takes a list of trees as an argument but when I look
> at the source code it looks like it also can take a guide tree as a second
> parameter.  That second parameter is not in the documentation.  How would I
> specifically report that?
> 
> 
> 
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