[Bioperl-l] Bioperl module for simulated reads
Jason Stajich
jason.stajich at gmail.com
Thu Jun 23 20:10:50 UTC 2011
that's great that you are contributing this, but we should see about spliting any new modules/code off from the main trunk though - per the GSoC project.
On Jun 23, 2011, at 12:34 PM, Florent Angly wrote:
> Hi all,
>
> I just wanted to let me know that, in the context of my program that generates simulated amplicon and shotgun datasets, Grinder (https://sourceforge.net/projects/biogrinder/files/biogrinder/), I developed a Bioperl module that facilitates taking simulated reads from a reference sequences. I called it Bio::Seq::SimulatedRead: https://github.com/bioperl/bioperl-live/blob/master/Bio/Seq/SimulatedRead.pm. I welcome testing and feedback!
>
> Florent
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