[Bioperl-l] Mouse->Human homologues ?

[lumos lumos]

Hi Chris,

Thanks for your reply. I wanted to know if there is anyway you can do it
via script/automatically in perl for a list of mouse genes whose human
homologues I require.

LM

On Fri, Dec 9, 2011 at 9:17 AM, Fields, Christopher J <cjfields at illinois.edu
> wrote:

> There are lots of databases that have this capability (ensembl, orthodb,
> homologene, oma, to name only a few).  Have you tried a simple search for
> this, or did you want expert opinion on the matter?
>
> chris
>
> PS - Just to note, there is a lot of controversy swirling about re: the
> ortholog conjecture and some recently published papers calling it into
> question using human-mouse data, worth a look if you're trotting this path
> to know the current situation.  If you have access to F1000, see the
> following (paper itself is open :)
>
> Faculty of 1000 evaluations, dissents and comments for [Nehrt NL et al.
> Testing the ortholog conjecture with comparative functional genomic data
> from mammals. PLoS Comput Biol. 2011 Jun; 7(6):e1002073; doi:
> 10.1371/journal.pcbi.1002073]. Faculty of 1000, 31 Aug 2011.
> F1000.com/12462957
>
> On Dec 9, 2011, at 10:47 AM, lumos lumos wrote:
>
> > Hello,
> >
> > Is there a way to get human homologues for a mouse gene list where I get
> > all human genes(symbols) as text output ?
> >
> > Thank you
> > LM
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>