[Bioperl-l] Announcing Bio::SFF

Adam Witney awitney at sgul.ac.uk
Mon Dec 19 15:03:16 UTC 2011


>>> One thing to check is what Ion Torrent's SFF files use. I would
>>> guess they've followed Roche, but I don't know. After all, the
>>> index structure is not defined in the SFF specification - it was
>>> left extensible on purpose.
>> 
>> Yeah, we should check that too.
> 
> I don't have any Ion Torrent data first hand, and the public
> samples I've seen were FASTQ not SFF. But I know a few
> people with Ion Torrent machines that might be able to help…

I can you let you have some Ion Torrent SFF files if it helps

adam





More information about the Bioperl-l mailing list