[Bioperl-l] Standalone blast

[Dave Messina]

Hi Kamal,

This is covered in the beginners' HOWTO:
http://www.bioperl.org/wiki/HOWTO:Beginners#BLAST


Dave


On Thu, Apr 28, 2011 at 07:22, khush ........ <bioinfo.khush at gmail.com>wrote:

> Hi,
>
> I have some sequences ~250 and wanted to use BLASTX to blast against nr
> database of NCBI, as this is time consuming using web based search. Can
> some
> one please tell me how to start BIOPERL with scuh problems. I know that
> this
> is possible with bioperl, but do not know how.
>
> Any suggestion will be appreciable.
>
> Thanks in advance
> Kamal
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