[Bioperl-l] Bio::Index::Fastq - Interface for indexing (multiple) fastq files failure

[Peter]

On Wed, Apr 7, 2010 at 4:25 PM, Cook, Malcolm <MEC at stowers.org> wrote:
> c.f. http://github.com/acr/screed

That's the python thing I referred to earlier, which turned out to be much
slower than SQLite (comparing storing the FASTQ data in an indexed
form, not just storing the file offsets):

http://lists.idyll.org/pipermail/biology-in-python/2010-March/000511.html
http://ivory.idyll.org/blog/mar-10/storing-and-retrieving-sequences.html

Peter