[Bioperl-l] problem in installation of bioperl

[徐相]

Hi Mark,

Thanks for your help. It works.

Xiang


2009-10-28 



徐相 



发件人： Mark A. Jensen 
发送时间： 2009-10-28  22:02:49 
收件人： 徐相; Chris Fields 
抄送： bioperl-l 
主题： Re: [Bioperl-l] problem in installation of bioperl 
 
Xiang-
Here's a procedure I know will get around this. Make sure you
have the module PPM-Repositories installed.
Run ppm-shell, then do
ppm> repo add http://bioperl.org/DIST
ppm> repo add uwinnipeg
ppm> repo add trouchelle
If you do
ppm> repo
you should see something like
 You should see something like
│ id │ pkgs  │ name                           │
│  1 │ 11431 │ ActiveState Package Repository │
│  2 │    14 │ bioperl.org                    │
│  3 │   291 │ uwinnipeg                      │
│  4 │ 11755 │ trouchelle                     │
Now do
# turn off ActiveState, trouchelle repos
ppm> repo off 1
ppm> repo off 4
# to get SOAP-Lite-0.69 from uwinnipeg...
ppm> install SOAP-Lite
# turn ActiveState, trouchelle back on...
ppm> repo on 1
ppm> repo on 4
# now try...
ppm> install BioPerl
cheers MAJ
----- Original Message ----- 
From: "徐相" <simonstudy at 163.com>
To: "Chris Fields" <cjfields at illinois.edu>
Cc: "bioperl-l" <bioperl-l at lists.open-bio.org>
Sent: Wednesday, October 28, 2009 9:43 AM
Subject: Re: [Bioperl-l] problem in installation of bioperl
> Hi Chris,
> Thanks for your answer. I know that the reason may be the dependency, but I 
> still don't know where to find the needed package to install. It is not in the 
> repositories which are said on the Bioperl website. Could you help me to 
> figure it out.
>
> Xiang
> 2009-10-28
>
>
>
> 徐相
>
>
>
> 发件人： Chris Fields
> 发送时间： 2009-10-28  20:10:52
> 收件人： 徐相
> 抄送： bioperl-l
> 主题： Re: [Bioperl-l] problem in installation of bioperl
>
> This should only be a warning (the ActiveState SOAP-Lite package has
> this dependency).  It should still install.
> chris
> On Oct 28, 2009, at 6:43 AM, 徐相 wrote:
>> Hi all,
>>
>> I got a problem when I installed Bioperl with activeperl ppm on
>> Windows platform. When I marked the Bioperl package for install in
>> ppm, I got a warning message which said "WARNING: Can't find any
>> package that provides Apache:: for SOAP-Lite". I had added all the
>> repository links to ppm, which is suggested on the Bioperl wiki web.
>> Is there anyone who knows what is the problem and how to fix it?
>> Thanks in advance.
>>
>> Xiang
>>
>> 2009-10-28
>>
>>
>>
>> 徐相
>>
>> _______________________________________________
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
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>
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