[Bioperl-l] Plse help! Probs with SeqIO in web service (web form)!!!

[Julio514]

Thank you for your reply. I solved the prob by declaringthe env variable
CLUSTALDIR in the httpd.conf file... 

Cheers,


Mark A. Jensen wrote:
> 
> The 'Invalid argument' appears to be thrown in DOS when there is not enuf
> space
> in the partition. In any case, this is pretty clearly an OS issue- Don't
> forget 
> too that
> the web server prob doesn't have the same permissions when running the
> script
> as the user, even when running it in the same place. MAJ
> ----- Original Message ----- 
> From: "Julio514" <suedejohnny at hotmail.com>
> To: <Bioperl-l at lists.open-bio.org>
> Sent: Sunday, February 08, 2009 2:26 PM
> Subject: [Bioperl-l] Plse help! Probs with SeqIO in web service (web
> form)!!!
> 
> 
>>
>> Hello everyone,
>>
>> I've been using bioperl for more than one year now. Recently, I started a
>> project of establishing a web service that accept for input one or many
>> fasta sequences. I tested my script offline with .fa files directly on my
>> HD
>> to make sure everything was fine. And it was... After that, I modified
>> the
>> script with some CGI lines to make it compatible with web forms. (btw I
>> still am a noob in web services:)). Anyway, the fasta input sequences
>> seems
>> to cause a prob I never encountered before and I am clueless... Here it
>> is:
>>
>> Error in tempdir() using \\\\XXXXXXXXXX: Could not create directory
>> \\\\6RzqdL7zU9: Invalid argument at C:/perl/site/lib/Bio/Root/IO.pm line
>> 744,
>>
>> Anyone ever saw that ?
>> I made sure that my $ENV{TMPDIR} was NOT read-only...
>>
>> Cheers,
>> -- 
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>>
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>> 
> 
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