[Bioperl-l] SimpleAlign add_seq ("%s/%d-%d",$id,$start,$end)

Albert Vilella avilella at gmail.com
Fri Oct 14 04:39:44 EDT 2005


Hi all,

I was wondering why the add_seq method in SimpleAlign will always give
the name of the sequence accompanied by a start and end tag.

SimpleAlign.pm
line 256:
    $name = sprintf("%s/%d-%d",$id,$start,$end);

In one of my scripts I am using this method by I would not like to have
this "/%d-%d" tail in the sequences' names.

How do you think this should be addressed? Am I using a bad combination
of method calls for my script? 

Bests,

    Albert.



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