[Bioperl-l] Newbie question: How should I report bugs / suggested changes i.e. in Bio::Matrix::Generic?

Wiersma, Paul WiersmaP at AGR.GC.CA
Wed May 25 19:46:54 EDT 2005


Hi Jason Stajich et al,

 

I've made some necessary changes to my copy of Bio::Matrix::Generic but
wanted to check if there is an agreed upon protocol for using CVS or
should I direct them to the builder/maintainer?  I've also added a few
lines to initialize an 'empty' matrix using only row and column headings
so that I can fill it in using header values.  Works better than
building the array of array refs from scratch each time to build up the
matrix framework.

 

Matrix appears to be 0-based. line 38f says:

  Data can be accessed by column and row names or indexes.  Matrix 

  indexes start at 1.

Methods: remove_column and remove_row have a few intercopying errors

 

Regards,

 

Paul

 

wiersmap at agr.gc.ca




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