[Bioperl-l] help me with "blastall call crashed:-1"
sasalacolla at libero.it
sasalacolla at libero.it
Tue Mar 15 10:18:17 EST 2005
Hi, please help me. I tried to use psort, but i only got this message:
Fatal error:
------------- EXCEPTION -------------
MSG: blastall call crashed: -1 /usr/bin/blastall -p blastp
-d /usr/local/psort//conf/analysis/sclblast/gramneg/sclblast
-i /tmp/IBcvdGTw4w -e 1e-09 -o /tmp/NaRiG0fdH8 -F F
STACK
Bio::Tools::Run::StandAloneBlast::_runblast /usr/share/perl5/Bio/Tools/Run/StandAloneBlast.pm:732
STACK
Bio::Tools::Run::StandAloneBlast::_generic_local_blast /usr/share/perl5/Bio/Tools/Run/StandAloneBlast.pm:680STACK
Bio::Tools::Run::StandAloneBlast::blastall /usr/share/perl5/Bio/Tools/Run/StandAloneBlast.pm:536
STACK
Bio::Tools::Run::SCLBlast::blast /usr/local/share/perl/5.8.4/Bio/Tools/Run/SCLBlast.pm:134
STACK
Bio::Tools::PSort::Module::SCLBlast::run /usr/local/share/perl/5.8.4/Bio/Tools/PSort/Module/SCLBlast.pm:72
STACK
Bio::Tools::PSort::Pathway::__ANON__ /usr/local/share/perl/5.8.4/Bio/Tools/PSort/Pathway.pm:194
STACK
Bio::Tools::PSort::Pathway::traverse /usr/local/share/perl/5.8.4/Bio/Tools/PSort/Pathway.pm:157
STACK
Bio::Tools::PSort::classify /usr/local/share/perl/5.8.4/Bio/Tools/PSort.pm:160
STACK (eval) /usr/local/bin/psort:318
STACK toplevel /usr/local/bin/psort:318
--------------------------------------
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