[Bioperl-l] Core dump in t/protgraph on FreeBSD

[Aaron J. Mackey]

Please use the CVS HEAD ...

-Aaron

Fernan Aguero wrote:

> +----[ Peter van Heusden <pvh at egenetics.com> (25.Nov.2004 07:03):
> |
> | Hi
> 
> Hi Peter!
> 
> I've been trying to get some spare time to test the 1.5
> release candidates on FreeBSD, but have not yet managed to
> do it.
> 
> Are you using 1.5 from CVS or from the rc1 tarball?
> 
> Fernan
> 
> | I'm seeing a core dump in the t/protgraph test with perl 5.8.5 on 
> | FreeBSD 4.10-STABLE. The core dump is coming from 
> | Bio::Graph:::ProteinGraph, line 414, where Clone's clone method is being 
> | called. Since clone() is implemented in XS, I imagine some kind of 
> | pointer trouble is causing this problem.
> | 
> | Is anyone else seeing this problem? Its the only thing that stops me 
> | from having a 'green light' on my bioperl tests page. :(
> | 
> | Peter
> |
> +----]
>