[Bioperl-l] remote blast put HITLIST_SIZE = 1000

[Madeleine Lemieux]

Karolina,

You also have to add the following key/value pair to %HEADER in 
RemoteBlast.pm:
	HITLIST_SIZE => 1000

or add the following line to Perl.pm:
	Bio::Tools::Run::RemoteBlast::HEADER{'HITLIST_SIZE'} = 1000;

See http://www.ncbi.nlm.nih.gov/BLAST/Doc/node3.html for a list of 
BLAST Put and Get command options.

Regards,
Madeleine

> Hi,
>
> I would like to change the number of descriptions I get in my blast 
> report from
> default 100 to 1000. I tried with adding a header
>
> $Bio::Tools::Run::RemoteBlast::HEADER{'DESCRIPTIONS'} = 1000;
>
>  and I even changed the value in RemoteBlast.pm module itself and 
> still no change.
>
> -Karolina