[Bioperl-l] desc in fasqta names

[Remo Sanges]

Gilles,

function desc 'GET/SET description for your sequence'
so you can easily put a blank description in your script:

$seq->desc('');


Remo

On Mar 29, 2004, at 3:48 PM, Gilles Parmentier wrote:

> Hello all,
>
> I'm using SeqIO to transform a genbank file in a fasta file. I don't 
> want to have the result of a desc call in the fasta name, how can I do 
> that ? My problem seems to come from those lines in SeqIO/fasta.pm 
> (write_seq) :
>
>        if ($seq->can('desc') and my $desc = $seq->desc()) {
>            $desc =~ s/\n//g;
>            $top .= " $desc";
>        }
>
> How can I turn this feature off ?
>
> Thanks in advance for your help,
>
> Gilles
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