[Bioperl-l] desc in fasqta names
Gilles Parmentier
Gilles.Parmentier at ens-lyon.fr
Mon Mar 29 08:48:42 EST 2004
Hello all,
I'm using SeqIO to transform a genbank file in a fasta file. I don't
want to have the result of a desc call in the fasta name, how can I do
that ? My problem seems to come from those lines in SeqIO/fasta.pm
(write_seq) :
if ($seq->can('desc') and my $desc = $seq->desc()) {
$desc =~ s/\n//g;
$top .= " $desc";
}
How can I turn this feature off ?
Thanks in advance for your help,
Gilles
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