[Bioperl-l] bioperl graphic question

jun hu junhu54 at hotmail.com
Fri Jan 2 18:30:06 EST 2004


Sorry for the previous email. I just find the way to solve my problem ...
I have to "export LANG=en_US" before I do the bundle::BioPerl 
installation... after I did that, bundle installable worked, and so does the 
png images.... now I am going to try it on my linux 7.3 mahcine, hope 
anything is work well too...
Best regards,
Jun Hu


>From: Jason Stajich <jason at cgt.duhs.duke.edu>
>To: Lincoln Stein <lstein at cshl.edu>
>CC: Todd Harris <harris at cshl.org>, bioperl-l at bioperl.org,   jun hu 
><junhu54 at hotmail.com>
>Subject: Re: [Bioperl-l] bioperl graphic question
>Date: Wed, 31 Dec 2003 16:24:05 -0500 (EST)
>
>I built gd2 from the fedora SRPMs and had no problem (save other RPMs
>dependancy on libgd 1.8 (gnuplot,php,webalizer on RHL 7.3))
>
>SRPM is here
>http://download.fedora.redhat.com/pub/fedora/linux/core/1/i386/os/SRPMS/gd-2.0.15-1.src.rpm
>
>I can put the compiled RPMs for 7.3 and 9.0 on the bioperl site if it
>would help.
>
>-jason
>On Wed, 31 Dec 2003, Lincoln Stein wrote:
>
> > Does anyone know where the gd2 RPMs can be found?  I know almost
> > nothing about RPMs.
> >
> > Lincoln
> >
> > On Tuesday 30 December 2003 10:24 am, Jason Stajich wrote:
> > > We might want to post pointers to gd2 rpms for the redhat crowd...
> > > as RH 9 still ships with libgd 1.8.x
> > >
> > >
> > > -jason
> > >
> > > On Mon, 29 Dec 2003, Todd Harris wrote:
> > > > Hi Jun Hu -
> > > >
> > > > As noted in the install guide, you will need to upgrade your
> > > > libgd. Although using libgd 1.8.4 may not necessarily result in
> > > > runtime errors, graphical elements may not appear as intended.
> > > > Some glyphs will not render at all with 1.8.4.
> > > >
> > > > We needed to move to libgd2 in order to support the generation of
> > > > both raster (png) and vector (svg) images from the same codebase.
> > > >
> > > > todd
> > >
> > > --
> > > Jason Stajich
> > > Duke University
> > > jason at cgt.mc.duke.edu
> > > _______________________________________________
> > > Bioperl-l mailing list
> > > Bioperl-l at portal.open-bio.org
> > > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >
>
>--
>Jason Stajich
>Duke University
>jason at cgt.mc.duke.edu
>_______________________________________________
>Bioperl-l mailing list
>Bioperl-l at portal.open-bio.org
>http://portal.open-bio.org/mailman/listinfo/bioperl-l

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