[Bioperl-l] Fasta Genome Splice

David Clark dfclark at neo.tamu.edu
Thu Feb 12 13:16:45 EST 2004


Hello,

I'm a relative newcomer to bioperl, and would like a point in the right 
direction.  I need to separate the yeast genome into two partial 
genomes--one with all ORF's, and one with everything else.  I have a 
tab delimited list of the ORF's with the coordinates, and can probably 
parse that myself, but I wanted to see if anyone could point me to some 
example code, or give me some place to start in separating genomes 
based on the coordinates.

Thanks,

David Clark
dfclark at neo.tamu.edu



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