[Bioperl-l] Trouble installing bioperl-ext /
Bio::SeqIO::staden::read
Aaron J. Mackey
amackey at pcbi.upenn.edu
Thu Apr 1 13:36:24 EST 2004
> At the end of the installation instructions for
> Bio::SeqIO::staden::read it says, "A failed compilation is most likely
> due to an incomplete io_lib installation; make sure that all the
> required io_lib ".h" files are in place." How do I determine what
> ".h" files are required in io_lib? I currently have the following:
>
> abi.h compression.h misc.h scf_extras.h traceType.h
> alf.h error.h open_trace_file.h scf.h translate.h
> array.h expFileIO.h os.h seqIOABI.h xalloc.h
> calc_crc.h fpoint.h plain.h seqIOCTF.h ztr.h
> compress.h mach-io.h Read.h tar_format.h
Looks like you're missing "config.h". It's really too bad that the
io_lib installation doesn't actually install everything one would need
to make any legitimate use of it. I'm sorry this continues to be a
frustration for people ...
-Aaron
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