[Bioperl-l] xyplot weirdness

[Lincoln Stein]

Hi Tobias,

You might try updating to the version of bioperl-live I checked in about three 
weeks ago.  There were quite a few bugs in the xyplot glyph that I quashed.  
However, you might as well send along a dataset and config file that 
reproduces the problem and I'll work on it here too.

Lincoln


On Thursday 13 November 2003 10:07 am, Tobias wrote:
> hi,
>
> when trying to use xy-plot (boxes) in gbrowse I get unpredictable
> rendering of the scores. if I set a set the scores of all subfeatures
> that I aggregate to the same value (i.e. 5) the boxes are not rendered
> at all, means they have a height of zero. when I change the value of
> one subfeature to a different value (i.e. 3), all but this subfeature
> are rendered properly. the changed subfeature gets a box of zero
> height, while the other ones now have a clear 5. furthermore this
> behaviour changes (i did not say improve) when changing zoom levels.
> sometimes, not always.
> I'm using bioperl v. 1.302 and gbrowse v. 1.54
>
> looks like a bug, a known-one?
>
> cheers
> Tobias
>
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-- 
Lincoln Stein
lstein at cshl.edu
Cold Spring Harbor Laboratory
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