[Bioperl-l] post translational modifications

[Jason Stajich]

Bio::Seq::Meta should do what you want.

We need someone to write up a tutorial which would show exactly what you
are asking for - I would also like to see an example for RNA sequence +
2ndary structure encoding.

-jason

On Mon, 3 Nov 2003, Koen van der Drift wrote:

> Hi,
>
> Is it possible to add post translational modifications to an amino acid
> sequence? For instance, in the following example, I would like to put a
> phosphate-group on the 2nd serine:
>
> my $seq = Bio::Seq->new('-seq' => 'QWERTHGSSTYNMKGEDDLKR', '-alphabet'
> => 'protein' );
>
>
> thanks,
>
>
> - Koen.
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu