[Bioperl-l] SearchIO, last hit in blast report dropped

[Jason Stajich]

On Sat, 24 May 2003, Hilmar Lapp wrote:

> Can the fix be back-ported to the 1.2 branch?
>
> I just committed a couple of ontologyIO-related fixes to both HEAD and
> stable branch. Nothing serious. Still, I think what has accumulated is
> worth targeting 1.2.2 before BOSC.
>
Major changes have happened on main trunk since 1.2 branch - but I'll see
if I can reproduce the bug and then dig out a bug fix.  If we release
1.2.2 we need to make sure Bio::Tools::Run::WrapperBase is tagged 1-2-2 in
it.

-jason

> (translated to Viennese: des geht si'aus, wemma sehn!)
>
> 	-hilmar
>
> On Saturday, May 24, 2003, at 05:53  AM, Jason Stajich wrote:
>
> > As I already added to the bug report, this is already fixed on the main
> > trunk code (what is in CVS).
> >
> > On Sat, 24 May 2003, claus vogl wrote:
> >
> >> Dear All,
> >>
> >> When parsing a blast report, SearchIO consistently misses the last
> >> hit.
> >> Michael already pointed this out in a bug report. Is this problem
> >> fixed
> >> by now? I would need this feature in shape for my work, because I
> >> often
> >> have reports with just a single hit, which are now skipped entirely by
> >> SearchIO.
> >>
> >> Baba (bye in Viennese dialect)
> >>
> >> Claus
> >>
> >> _______________________________________________
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> >>
> >
> > --
> > Jason Stajich
> > Duke University
> > jason at cgt.mc.duke.edu
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu