[Bioperl-l] how to translate a codon to 3 letters aa code?

Magic Fang fangl at genomics.org.cn
Wed Mar 19 17:22:42 EST 2003


yes, but i do not want to create a Bio::Seq object. any method?
----- Original Message ----- 
From: "Marc Logghe" <Marc.Logghe at devgen.com>
To: "'Magic Fang'" <fangl at genomics.org.cn>
Cc: "Bioperl (E-mail)" <bioperl-l at bioperl.org>
Sent: Wednesday, March 19, 2003 5:23 PM
Subject: RE: [Bioperl-l] how to translate a codon to 3 letters aa code?


> 
> > Subject: [Bioperl-l] how to translate a codon to 3 letters aa code?
> > 
> > 
> > if Bio::Tools::CodonTable can only get 1 letter aa code?
> > 
> You can use Bio::SeqUtils for that:
> print Bio::SeqUtils->seq3($seq)
> HTH,
> Marc
> 



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