[Bioperl-l] SearchIO question

Steve Chervitz sac at bioperl.org
Fri Mar 7 11:25:03 EST 2003


On Friday, Mar 7, 2003, at 09:04 US/Pacific, Brian Osborne wrote:

> Shin,
>
>> I was using Steve's psiblast
>> $result->no_hits_found() method.  Is this going to be phased out?
>
> I can't speak for Steve, but he typically provides a multitude of 
> novel and
> useful methods to the user. Your thoughts, Steve?

Yes, I intend on preserving no_hits_found(). This is important when 
hits are being filtered at parse time, which SearchIO::psiblast does 
but SearchIO::blast doesn't (yet).

Steve



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