[Bioperl-l] problem unigene parsing

Siddhartha Basu basu at pharm.sunysb.edu
Thu Mar 6 15:28:00 EST 2003


Hi Hilmar,
Thanks a lot for the work. It's working now as expected.

siddhartha

Hilmar Lapp wrote:
> I guess it's a left-over from a debugging session. I removed it. This is 
> not present on the 1.2 branch.
> 
>     -hilmar
> 
> On Wednesday, March 5, 2003, at 05:50  PM, Andrew Macgregor wrote:
> 
>> Hi Siddhartha,
>>
>> Yes I can reproduce this problem. When a Unigene object is created it 
>> uses Species.pm that has this code segment that seems to print the 
>> message you are getting (I think). Can anyone else help me out as to 
>> why this is happening?
>>
>>
>>   if( defined $classification &&
>>       (ref($classification) eq "ARRAY") ) {
>>       print "classification was @$classification\n";
>>       $self->classification(@$classification);
>>   }
>>
>> -- Andrew.



More information about the Bioperl-l mailing list