[Bioperl-l] Bio::Graphics::Panel can't locate object method 'start'...

[Ewan Birney]

On Sat, 1 Mar 2003, Lincoln Stein wrote:

> Hi Matt,
>
> You and about a million other people have the same problem.  You can do one of
> two things:
>
> 	1) get the latest bioperl-live from CVS, where the problem is fixed
> transparently in Bio::Graphics::Panel
>
> or
>
> 	2) make the following type of change in all your scripts:
>
> OLD WAY:
>  my $panel = Bio::Graphics::Panel->new(	-segment => $seq,
>  							-key_style => 'between',
>  							-pad_left  => 10,
>  							-pad_right  => 10,
>  							-width  => 800	);
>
> NEW WAY:
>  my $panel = Bio::Graphics::Panel->new( -length => $seq->length,
>  							-key_style => 'between',
>  							-pad_left  => 10,
>  							-pad_right  => 10,
>  							-width  => 800	);
>
> Sorry about this, but Bioperl is large and amoeboid, and sometimes one
> pseudopodium doesn't know what the other is doing.

This was my/heikki's fault, but at the time I hadn't realised this knock
on effect. Apologies.

next time, I listen more to the other pseudopodium...