[Bioperl-l] Bio::DB::Genbank Problem

Jason Stajich jason at cgt.duhs.duke.edu
Thu Jul 17 11:30:10 EDT 2003


On Thu, 17 Jul 2003, MArkus Kador wrote:

> Hi,
>
> I'm not sure if this is a bug in the conventional meaning of the word:
> For about two days I'm not able to use the Bio::DB::GenBank module to
> retrieve Data from NCBI.
> It works neither in my script (which until now has always worked fine)
> nor in the bptutorial.pl Example 1.
> This is reproducible on my machine, on our server and on the machine of
> a friend (on another Internet connection).
>
> Is this a load-problem at NCBI, did they change something?
> Can you reproduce this?
> I use bioperl 1.0 on an OS X machine, the friend uses 1.0 on Linux
                ^^^^
Pretty sure you need to upgrade - NCBI has changed their URLs.

>
> Thanks in advance,
>
> Markus Kado
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu


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