[Bioperl-l] Hello LocusLink!!!
lstein at cshl.edu
Wed Jul 16 13:24:24 EDT 2003
Frankly I don't know if Boulder::LocusLink still works. I have stopped
maintaining Boulder::* because it got too frustrating tracking the changes to
I suggest that you download the raw LocusLink files and use
Bio::SeqIO::locuslink to parse the data.
On Wednesday 16 July 2003 11:45 am, Line Neil wrote:
> I am trying to understand Boulder::LocusLink because it seams to be the
> module that I need for my second step search: I obtained the accession
> number (ex: NM_...) after submitting my queries to some blast;
> From them, I would like to obtain the approved name, approved symbol,
> the locus, the Unigene reference, the omim link (something like what is
> given on the blast server L:Locus link informations but every query in
> a table)
> I need help to know if it is the right tool and where I can find some
> more understandable docs for my newby level!!
> Thanks in advance again!
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
Lincoln D. Stein Cold Spring Harbor Laboratory
lstein at cshl.org Cold Spring Harbor, NY
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