[Bioperl-l] Using primer3
shawnh at fugu-sg.org
Wed Jul 9 18:20:33 EDT 2003
On Wednesday, July 9, 2003, at 09:48 AM, Heikki Lehvaslaiho wrote:
> It would be great if you could work on primer3 wrapper/parser.
> I am working on the Resriction modules and expect to do the first
> any day now, so do not touch them.
Yup no problems.
> On Wed, 2003-07-09 at 09:32, Shawn Hoon wrote:
>> On Tuesday, July 8, 2003, at 02:26 AM, Mike Muratet wrote:
>>> I'm trying to sort out running the primer3 methods in bioperl 1.2.1
>>> (the latest stable, isn't it?).
>> bioperl 1.2.2 is just out available at:
>> bioperl-run is available at:
>>> I see by the README in Bio/Tools/Run that this is a separate branch,
>>> but I don't see at www.bioperl.org or CPAN where it can be
>>> (There is no Run::Primer3 that I can see in the directory.)
>>> I've looked through the wikis and searched the web, but I can't
>>> out how to use it. I know it's a simple answer, could someone clue me
>> Currently Primer3 has no wrapper in bioperl-run. However I managed to
>> dig up an April Email by Rob
>> that has a link to some modules that he has written for working with
>> Rob I can integrate this with bioperl-run if its okay with you.
>> Are you still having problems with the WrapperBase I/O handling?
>>> Bioperl-l mailing list
>>> Bioperl-l at portal.open-bio.org
>> Bioperl-l mailing list
>> Bioperl-l at portal.open-bio.org
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> _/ _/ _/ Heikki Lehvaslaiho heikki_at_ebi ac uk
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