[Bioperl-l] how to change the sequence of a Bio::Seq object

[Brian Osborne]

Peili,

> it'll be really nice to have the documentation updated.

That would be nice, true. What would also be nice would be more people
writing documentation. With more people writing documentation errors like
these wouldn't exist. Would you like to help?

Brian O.



-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Peili Zhang
Sent: Thursday, July 03, 2003 3:41 PM
To: peili at morgan.harvard.edu; jason at cgt.duhs.duke.edu
Cc: harvdev at morgan.harvard.edu; bioperl-l at bioperl.org
Subject: Re: [Bioperl-l] how to change the sequence of a Bio::Seq object


>
>$seq->seq($newsequencestring)
>(remember we won't remap feature locations for you though)
>

Thanks, it works. however, the bioperl documentation for bioperl-1.2 says
the
seq method of Bio::Seq module takes no argument and returns the sequence of
the
object. so I thought it's only a getter but not a setter. is there a newer
version of the documentation? if not, it'll be really nice to have the
documentation updated.

-Peili

>
>On Thu, 3 Jul 2003, Peili Zhang wrote:
>
>> Hi,
>>
>> how can I change the sequence and length of a Bio::Seq object while
>> keeping everything else intact?
>>
>> thanks,
>>
>> Peili
>> FlyBase-Harvard
>>
>> _______________________________________________
>> Bioperl-l mailing list
>> Bioperl-l at portal.open-bio.org
>> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>>
>
>--
>Jason Stajich
>Duke University
>jason at cgt.mc.duke.edu

_______________________________________________
Bioperl-l mailing list
Bioperl-l at portal.open-bio.org
http://portal.open-bio.org/mailman/listinfo/bioperl-l