[Bioperl-l] Problem untarring the 1.2 distribution

[Heikki Lehvaslaiho]

Tim,

The file you get is definitely different from the one I get using the
same method. My file uncompresses without an error. See my results below
(time difference is due to time zones). 

	-Heikki 



On Thu, 2003-01-02 at 10:04, Tim Henderson wrote:
> I've tried to download and untar it in multiple ways: On RedHat Linux 
> 7.3, Mac OS X 10.2.3, and Windows 2000, using wget, Mozilla, and 
> Internet Explorer for the download. I always get the same error. Below 
> is an example from RedHat Linux 7.3, including the checksums I get from 
> the download file.
> 
> 
> -- Tim
> 
> 
> [tjh@feature tjh]$ cat /etc/redhat-release
> Red Hat Linux release 7.3 (Valhalla)
> 

Red Hat Linux release 7.1 (Seawolf)


> [tjh@feature tjh]$ wget http://www.bioperl.org/ftp/DIST/bioperl-1.2.tar.gz
> --01:39:27--  http://www.bioperl.org/ftp/DIST/bioperl-1.2.tar.gz
>             => `bioperl-1.2.tar.gz'
> Resolving www.bioperl.org... done.
> Connecting to www.bioperl.org[155.94.54.80]:80... connected.
> HTTP request sent, awaiting response... 200 OK
> Length: 3,425,575 [application/x-tar]
> 
> 100%[========================================================>] 
> 3,425,575     40.73K/s    ETA 00:00
> 
> 01:40:50 (40.73 KB/s) - `bioperl-1.2.tar.gz' saved [3425575/3425575]
> 
> 
> [tjh@feature tjh]$ ls -l bioperl-1.2.tar.gz
> -rw-rw-r--    1 tjh      tjh       3425575 Dec 31 05:55 bioperl-1.2.tar.gz
> 

-rw-r--r--    1 heikki  heikki  3425575 Dec 31 13:55 bioperl-1.2.tar.gz


> [tjh@feature tjh]$ sum bioperl-1.2.tar.gz
> 46201  3346
> 

45152  3346


> [tjh@feature tjh]$ perl -MDigest::MD5 -e '$f=shift; open FILE, $f; print 
> Digest::MD5->new->addfile(*FILE)->hexdigest, "  $f\n"' bioperl-1.2.tar.gz
> 9d643aa4e79af5dd2843124f2bbf8b56  bioperl-1.2.tar.gz
> 

23c0de12d08c394b336331caf33d3e94  bioperl-1.2.tar.gz


> 
> [tjh@feature tjh]$ gunzip -t bioperl-1.2.tar.gz
> 
> gunzip: bioperl-1.2.tar.gz: invalid compressed data--crc error
> 
> gunzip: bioperl-1.2.tar.gz: invalid compressed data--length error
> 
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-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
   _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
     _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
___ _/_/_/_/_/________________________________________________________