[Bioperl-l] Problem untarring the 1.2 distribution

Tim Henderson tjh@alodar.com
Thu, 02 Jan 2003 02:04:30 -0800


I've tried to download and untar it in multiple ways: On RedHat Linux 
7.3, Mac OS X 10.2.3, and Windows 2000, using wget, Mozilla, and 
Internet Explorer for the download. I always get the same error. Below 
is an example from RedHat Linux 7.3, including the checksums I get from 
the download file.


-- Tim


[tjh@feature tjh]$ cat /etc/redhat-release
Red Hat Linux release 7.3 (Valhalla)

[tjh@feature tjh]$ wget http://www.bioperl.org/ftp/DIST/bioperl-1.2.tar.gz
--01:39:27--  http://www.bioperl.org/ftp/DIST/bioperl-1.2.tar.gz
            => `bioperl-1.2.tar.gz'
Resolving www.bioperl.org... done.
Connecting to www.bioperl.org[155.94.54.80]:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 3,425,575 [application/x-tar]

100%[========================================================>] 
3,425,575     40.73K/s    ETA 00:00

01:40:50 (40.73 KB/s) - `bioperl-1.2.tar.gz' saved [3425575/3425575]


[tjh@feature tjh]$ ls -l bioperl-1.2.tar.gz
-rw-rw-r--    1 tjh      tjh       3425575 Dec 31 05:55 bioperl-1.2.tar.gz

[tjh@feature tjh]$ sum bioperl-1.2.tar.gz
46201  3346

[tjh@feature tjh]$ perl -MDigest::MD5 -e '$f=shift; open FILE, $f; print 
Digest::MD5->new->addfile(*FILE)->hexdigest, "  $f\n"' bioperl-1.2.tar.gz
9d643aa4e79af5dd2843124f2bbf8b56  bioperl-1.2.tar.gz


[tjh@feature tjh]$ gunzip -t bioperl-1.2.tar.gz

gunzip: bioperl-1.2.tar.gz: invalid compressed data--crc error

gunzip: bioperl-1.2.tar.gz: invalid compressed data--length error