[Bioperl-l] How to proceed with 1.4?

[Hilmar Lapp]

Heikki, is Xmas your deadline for getting 1.4 out the door?

I think it'd be useful to have Juguang's ontology term changes in 
before code freeze. OTOH the changes will be largely untested, but that 
could be handled with bug-fix releases.

Have you set a deadline for code-freeze already?

	-hilmar

On Tuesday, December 9, 2003, at 02:23  AM, Heikki Lehvaslaiho wrote:

>
> I have so far relased three snapshots from the bioperl core/live cvs 
> head.
> Things have settled down a bit, but there are still outstanding issues.
> Especially:
>
> - restriction analysis fixes need to merged and commited (Rob)
> - SearchIO::psiblast & related module removal (Steve)
> - really long qualifier names in sequence feature tables (Ewan?) #1561
>
> I'd like to see these in before I release the next and hopefully last 
> snap
> shot. Or would some like to see a snapshot out now?
>
>
> Then there is the issue of other cvs modlues closely tied to core. Ext 
> is
> simle there have been one major addition during last six months which 
> is well
> documented and seems to work without problems. I can release that the 
> same
> day as core.
>
> Run is a bit more complicated. There are issues with
> - newer version of EMBOSS, #1481
> - TCoffee, #1453, #1557 ( and  #1510, #1514)
>
> We need someone to look into these. It would be great to have them 
> fixed this
> week so the we could have all three packages out before Christmas.
>
> Any comments and contributions to that effect welcome,
>
> 	-Heikki
>
>
> -- 
> ______ _/      _/_____________________________________________________
>       _/      _/                      http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
>     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
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-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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