[Bioperl-l] about gff format to feature table format
Magic Fang
fangl at genomics.org.cn
Tue Aug 26 13:10:11 EDT 2003
dear my colleagues
i have a gff format file, such as:
#Seq. Source Feature Start End Score Strand Phase Group
CNS06C8G GlimmerM Terminal 160 228 1 - 0 Gene 1
CNS06C8G GlimmerM Internal 3771 3924 1 - 0 Gene 1
CNS06C8G GlimmerM Initial 5902 5915 1 - 1 Gene 1
CNS06C8G GlimmerM Initial 6330 6555 1 + 0 Gene 2
CNS06C8G GlimmerM Internal 6626 6706 1 + 1 Gene 2
CNS06C8G GlimmerM Internal 6913 7347 1 + 1 Gene 2
CNS06C8G GlimmerM Internal 7896 7975 1 + 1 Gene 2
CNS06C8G GlimmerM Internal 8131 8160 1 + 0 Gene 2
CNS06C8G GlimmerM Internal 12054 12113 1 + 0 Gene 2
CNS06C8G GlimmerM Internal 15857 16217 1 + 0 Gene 2
CNS06C8G GlimmerM Terminal 16377 16657 1 + 1 Gene 2
CNS06C8G GlimmerM Terminal 17607 17732 1 - 0 Gene 3
CNS06C8G GlimmerM Internal 17813 18361 1 - 0 Gene 3
CNS06C8G GlimmerM Initial 18659 18844 1 - 0 Gene 3
CNS06C8G GlimmerM Initial 19172 19268 1 + 0 Gene 4
can bioperl merge the entries belong to one gene to one sequence feature, when i use Bio::Tools::GFF?
thank you.
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