[Bioperl-l] epcr to gff parser.

Philip MacMenamin pm66 at nyu.edu
Wed Aug 13 11:20:49 EDT 2003


Hi, 

Appologies if this is silly question, but how would you parse an ePCR file 
and output a GFF file? 
I have been looking through bioPerl documentation and  

my $parser = new Bio::Tools::EPCR(-file => 'epcr_755_all.txt'); 

Seems to look right for a start, but how do output GFF? I was looking at the 
SeqAnalysisParserFactoryI get_parser method, Im just not sure how this is all 
working. I dont really want to write my own parser, since im sure somthing is 
out there already...

Thanks...


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