[Bioperl-l] StandAloneBlast

[Prachi Shah]

Hi,

That sounds very useful. I have had this problem where
I want to use the Paracel BLAST from a Perl program
and really wished that it were as easy as the serial
blastall with BioPerl. 
If it is somehow decided that this modified
StandAloneBlast.pm not be included in Bioperl, can I
still get the code? 

Thanks,
Prachi.


--- "Holzwarth,James,LAUSANNE,NRC/BS"
<James.Holzwarth at rdls.nestle.com> wrote:
> Hello,
> 
>   I have made a modification in our
> StandAloneBlast.pm to work with paracel
> and I was curious if this would be of interest to
> include in BioPerl.
> Basically, I have added a method to send the blast
> to paracel using pb
> blastall. Let me know if you would be interested
> and, if so, how should I
> proceed.
> 
> Regards,
> Jim
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l


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