[Bioperl-l] Parsing of Genewise output
Ewan Birney
birney@ebi.ac.uk
Tue, 3 Sep 2002 10:01:14 +0100 (BST)
What do you want parsed out?
Have you tried the -genes output of genewise (much easier to parse). Do
you want the alignments parsed out, in which case, cue early discussion
about how to represent frameshifts and introns...
(BTW - very happy that you are using Genewise. I hope it is useful for
you...)
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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney@ebi.ac.uk>.
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