[Bioperl-l] Parsing of Genewise output

Ewan Birney birney@ebi.ac.uk
Tue, 3 Sep 2002 10:01:14 +0100 (BST)


What do you want parsed out?

Have you tried the -genes output of genewise (much easier to parse). Do
you want the alignments parsed out, in which case, cue early discussion
about how to represent frameshifts and introns...



(BTW - very happy that you are using Genewise. I hope it is useful for
you...)





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